Preview

Veterinary Science Today

Advanced search

Antimicrobial resistance in clinical Escherichia coli isolates obtained from animals

https://doi.org/10.29326/2304-196X-2022-11-1-14-19

Abstract

The article presents data on the phenotypic and genotypic characteristics of antimicriobial resistance in Escherichia coli clinical isolates recovered from bovine microbiota (secretions from mammary glands, cervical swabs). 127 Escherichia coli isolates were studied, i.e. 44 from mammary glands secretions and 83 from cervical swabs. Disk diffusion method was used to study antimicrobial resistance of the cultures; minimum inhibitory concentrations of antimicrobials were determined in a serial dilution method; resistance genes were detected by polymerase chain reaction. The carried out research demonstrates a wide distribution of the isolates belonging to the phenotype resistant to ansamycins (rifampicin), semi-synthetic penicillins (ampicillin and amoxicillin), tetracyclines (doxycycline). The isolates showed a lower level of resistance to macrolides (azithromycin), amphenicols (levomycetin) and aminoglycosides (tobramycin). It was found that Escherichia coli clinical isolates are sensitive to third-generation cephalosporins and fluoroquinolone antimicrobials. However, since 28.46% of cultures demonstrate intermediate resistance to third-generation cephalosporins and 49.02% of Escherichia coli DNA samples isolated from mammal gland secretions had blaDHA gene associated with resistance to this group of antimicrobials, these antimicrobials could be hardly recommended as antibiotics of choice. Absence of VIM carbapenemase-encoding gene in the DNA of the recovered isolates and a low level of phenotypic resistance (10.22% of isolates from cervical swabs) can be one of the reasons for recommending first-line carbapenems as antibiotics of choice to treat animal diseases associated with Escherichia coli, along with fluoroquinolones as reserve antimicrobials. It was found that the recovered Escherichia coli isolates are more sensitive to combination antibiotics than to mono-antibiotics. 

About the Authors

M. N. Isakova
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Candidate of Science (Veterinary Medicine), Senior Researcher, Department of Reproductive Technologies, 

Ekaterinburg



O. V. Sokolova
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Doctor of Science (Veterinary Medicine), Senior Researcher, Laboratory of Animal Genomics and Selection,

Ekaterinburg



N. A. Bezborodova
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Candidate of Science (Veterinary Medicine), Senior Researcher, Department of Veterinary Laboratory Diagnosis withTesting Laboratory,

Ekaterinburg



A. S. Krivonogova
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Doctor of Science (Biology), Leading Researcher, Laboratory of Biological Technology,

Ekaterinburg



A. G. Isaeva
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Doctor of Science (Biology), Leading Researcher, Department of Epizootological Monitoring and Prognosis of Animals’ Infectious Diseases, 

Ekaterinburg



V. D. Zubareva
Federal State Budgetary Scientific Institution “Ural Federal Agrarian Scientific Research Centre, Ural Branch of the Russian Academy of Sciences” (FSBSI UrFASRC, UrB of RAS)
Russian Federation

Senior Specialist, Laboratory of Animal Genomics and Selection, 

Ekaterinburg



References

1. Paitan Y. Current Trends in Antimicrobial Resistance of Escherichia coli. Curr. Top. Microbiol. Immunol. 2018; 416: 181−211. DOI: 10.1007/82_2018_110.

2. Kaushik P., Anjay A., Kumari S., Dayal S., Kumar S. Antimicrobial resistance and molecular characterisation of E. coli from poultry in Eastern India. Vet. Ital. 2018; 54 (3): 197−204. DOI: 10.12834/VetIt.330.1382.2.

3. Krivonogova A., Isaeva A., Poryvaeva A., Chentsova A., Sharavyev P. Inhibitory effect of plant metabolites of Nigella sativa on conditionally pathogenic microflora of productive animals. E3S Web of Conferences EFSC. 2021; 282:04014. DOI: 10.1051/e3sconf/202128204014.

4. Gregova G., Kmet V. Antibiotic resistance and virulence of Escherichia coli strains isolated from animal rendering plant. Sci. Rep. 2020; 10 (1):17108. DOI: 10.1038/s41598-020-72851-5.

5. Lalak A., Wasyl D., Zając M., Skarżyńska M., Hoszowski A., Samcik I., et al. Mechanisms of cephalosporin resistance in indicator Escherichia coli isolated from food animals. Vet. Microbiol. 2016; 194: 69−73. DOI: 10.1016/j.vetmic.2016.01.023.

6. Ranjbar R., Moradi H., Harzandi N., Kheiri R., Khamesipour F. Integron-associated antibiotic resistance patterns in Escherichia coli strains isolated from human and animal sources in two provinces of Iran. Sovremennye tehnologii v meditcine. 2019; 11 (4): 64−73. DOI: 10.17691/stm2019.11.4.07. (in Russ.)

7. Buberg M. L., Mo S. S., Sekse C., Sunde M., Wasteson Y., Witsø I. L. Population structure and uropathogenic potential of extended-spectrum cephalosporin-resistant Escherichia coli from retail chicken meat. BMC Microbiol. 2021; 21 (1):94. DOI: 10.1186/s12866-021-02160-y.

8. Reshadi P., Heydari F., Ghanbarpour R., Bagheri M., Jajarmi M., Amiri M., et al. Molecular characterization and antimicrobial resistance of potentially human-pathogenic Escherichia coli strains isolated from riding horses. BMC Vet. Res. 2021; 17 (1):131. DOI: 10.1186/s12917-021-02832-x.

9. Poirel L., Madec J. Y., Lupo A., Schink A. K., Kieffer N., Nordmann P., Schwarz S. Antimicrobial resistance in Escherichia coli. Microbiol. Spectr. 2018; 6 (4). DOI: 10.1128/microbiolspec.ARBA-0026-2017.

10. Al'-Khammash N. M., Ignatenko A. V. Analiz antibiotikorezistentnosti mikroorganizmov E. coli = ARM analysis of E. coli. Proceedings of BSTU. Chemistry, organic substances technology and biotechnology. 2012; 4 (151): 173−175. eLIBRARY ID: 22002362.

11. Nolivos S., Cayron J., Dedieu A., Page A., Delolme F., Lesterlin C. Role of AcrAB-TolC multidrug efflux pump in drug-resistance acquisition by plasmid transfer. Science. 2019; 364 (6442): 778−782. DOI: 10.1126/science.aav6390.

12. Ilbeigi K., Askari Badouei M., Vaezi H., Zaheri H., Aghasharif S., Kafshdouzan K. Molecular survey of mcr1 and mcr2 plasmid mediated colistin resistance genes in Escherichia coli isolates of animal origin in Iran. BMC Res. Notes. 2021; 14 (1):107. DOI: 10.1186/s13104-021-05519-6.

13. Farmakologiya s retsepturoi: uchebnik dlya meditsinskikh i farmatsevticheskikh uchrezhdenii srednego professional’nogo obrazovaniya = Pharmaceutical formulation: a textbook for medical and pharmaceutical institutions of secondary vocational education. Ed. by. V. M. Vinogradov. 6rd ed., revised and updated. Saint Petersburg: SpetsLit; 2016. 647 р. (in Russ.)

14. Paramonova N. Yu., Firichenkova S. V. Territorial monitoring data on antibiotic resistance in colibacillus. Vestnik veterinarii. 2011; 4 (59): 78−80. eLIBRARY ID: 17069905. (in Russ.)

15. Litvinova A. R., Shevchenko A. A. Distribution of E. coli in the Krasnodar territory. Issues of Legal Regulation in Veterinary Medicine. 2020; 1: 44−46. DOI: 10.17238/issn2072-6023.2020.1.44. (in Russ.)

16. Metodicheskie ukazaniya po bakteriologicheskoi diagnostike kolibakterioza (esherikhioza) zhivotnykh = Guidance on bacteriological diagnosis of colibacteriosis in animals: approved. Ministry of Agriculture of the Russian Federation July 27, 2000 No. 13-7-2/2117. Available at: https://standartgost.ru/g/pkey-14293737720. (in Russ.)

17. MUK 4.2.1890-04 Opredelenie chuvstvitel’nosti mikroorganizmov k antibakterial’nym preparatam = Metodical Guidelines 4.2.1890-04 Determination of sensitivity of microorganisms to antibacterials. Мoscow: Federal Center for State Sanitary and Epidemiological Surveillance of the Ministry of Health of Russia. 2004. 91 p. Available at: https://fcgie.ru/download/elektronnaya_baza_metod_dokum/muk_1890-04.pdf. (in Russ.)

18. EUCAST Clinical breakpoints – bacteria v.10.0. Available at: https://iacmac.ru/ru/docs/eucast/eucast-clinical-breakpoints-bacteria-10.0-rus. pdf. (in Russ.)

19. Bezborodova N. A., Isakova M. N., Ryaposova M. V., Sokolova O. V. Analysis of the antibiotic resistance genes of microorganisms in the milk of cows and goats. Reproduction in Domestic Animals. 2019; 54 (S3):104. DOI: 10.1111/rda.13528.

20. Ingti B., Paul D., Maurya A. P., Bora D., Chanda D. D., Chakravarty A., Bhattacharjee A. Occurrence of blaDHA-1 mediated cephalosporin resistance in Escherichia coli and their transcriptional response against cephalosporin stress: a report from India. Ann. Clin. Microbiol. Antimicrob. 2017; 16 (1): 13. DOI: 10.1186/s12941-017-0189-x.

21. ECDC. The bacterial challenge: time to react. Stockholm. 2009. 42 p. DOI: 10.2900/2518.

22. Kuz’mina A. V., Asetskaya I. L., Polivanov V. A., Zyryanov S. K. Medication errors associated with carbapenems. Kachestvennaya klinicheskaya praktika = Good Clinical Practice. 2016; 4: 48−53. eLIBRARY ID: 29246908. (in Russ.)

23. Makavchik S. A., Krotova A. L., Bargman J. E., Sukhinin A. A., Prikhodko E. I. Resistance mechanisms of bacterial isolates from cattle to antibiotics. Issues of Legal Regulation in Veterinary Medicine. 2020; 4: 41−46. DOI: 10.17238/issn2072-6023.2020.4.41. (in Russ.)


Review

For citations:


Isakova M.N., Sokolova O.V., Bezborodova N.A., Krivonogova A.S., Isaeva A.G., Zubareva V.D. Antimicrobial resistance in clinical Escherichia coli isolates obtained from animals. Veterinary Science Today. 2022;11(1):14-19. https://doi.org/10.29326/2304-196X-2022-11-1-14-19

Views: 543


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2304-196X (Print)
ISSN 2658-6959 (Online)